PCR 酶切位点保护碱基

2010-03-02 10:13 · Chad

酶寡核苷酸序列切割率%2 hr20 hrAcc IGGTCGACCCGGTCGACCGCCGGTCGACCGG000000Afl IIICACATGTGCCACATGTGGCCCACATGTGGG0>90>900>90>90Asc IGGCGCGCCAGGCGCGCCTTTGGC

 

 

核苷酸序列

切割率%

2 hr

20 hr

Acc I

GGTCGACC
CGGTCGACCG
CCGGTCGACCGG

0
0
0

0
0
0

Afl III

CACATGTG
CCACATGTGG
CCCACATGTGGG

0
<90
<90

0
<90
<90

Asc I

GGCGCGCC
AGGCGCGCCT
TTGGCGCGCCAA

<90
<90
<90

<90
<90
<90

Ava I

CCCCGGGG
CCCCCGGGGG
TCCCCCGGGGGA

50
<90
<90

<90
<90
<90

BamH I

CGGATCCG
CGGGATCCCG
CGCGGATCCGCG

10
<90
<90

25
<90
<90

Bgl II

CAGATCTG
GAAGATCTTC
GGAAGATCTTCC

0
75
25

0
<90
<90

BssH II

GGCGCGCC
AGGCGCGCCT
TTGGCGCGCCAA

0
0
50

0
0
<90

BstE II

GGGT(A/T)ACCC

0

10

BstX I

AACTGCAGAACCAATGCATTGG
AAAACTGCAGCCAATGCATTGGAA
CTGCAGAACCAATGCATTGGATGCAT

0
25
25

0
50
<90

Cla I

CATCGATG
GATCGATC
CCATCGATGG
CCCATCGATGGG

0
0
<90
50

0
0
<90
50

EcoR I

GGAATTCC
CGGAATTCCG
CCGGAATTCCGG

<90
<90
<90

<90
<90
<90

Hae III

GGGGCCCC
AGCGGCCGCT
TTGCGGCCGCAA

<90
<90
<90

<90
<90
<90

Hind III

CAAGCTTG
CCAAGCTTGG
CCCAAGCTTGGG

0
0
10

0
0
75

Kpn I

GGGTACCC
GGGGTACCCC
CGGGGTACCCCG

0
<90
<90

0
<90
<90

Mlu I

GACGCGTC
CGACGCGTCG

0
25

0
50

Nco I

CCCATGGG
CATGCCATGGCATG

0
50

0
75

 

 

 

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