Installation of Psipred
Cliff Gao
(1) download the code of psipred from
https://bioinfadmin.cs.ucl.ac.uk/downloads/
# when I am writing this blog, psipred is v3.2
(2) tar -zxvf *.tar.gz file
cd psipred
cd src
make
make install
(3) open the runpsipred
change the
dbname # your database name; for my dbname is nr/filtnr
ncbidir # where you installed blast
(4) ./runpsipred example.fasta
# runpsipred is a script used the tcsh if you has not tcsh, type sudo apt-get install tcsh
That's all.
